FastQCFastQC Report
Mon 25 Mar 2013
39.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 39.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 34991740
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 2855931 8.161729025192804 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1695070 4.844200374145441 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1217365 3.479006759881046 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 875244 2.5012874466945627 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 768932 2.1974671736815603 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 596976 1.706048341694354 RNA PCR Primer, Index 1 (100% over 29bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 592336 1.6927880694129527 RNA PCR Primer, Index 1 (100% over 27bp)
CGCGACCTCAGATCAGATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 320588 0.9161819332219547 RNA PCR Primer, Index 1 (100% over 32bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 320125 0.9148587638111166 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 265712 0.7593563509559684 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 251448 0.7185924449598676 RNA PCR Primer, Index 1 (100% over 25bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 218364 0.624044417339635 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 200781 0.5737954157181094 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 195706 0.5592919929103268 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 183804 0.5252782513816118 RNA PCR Primer, Index 1 (100% over 27bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 170345 0.486814888313642 RNA PCR Primer, Index 3 (100% over 34bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 168335 0.4810706755365695 RNA PCR Primer, Index 1 (100% over 29bp)
ACCGGGGAAACCCGGTGATCTGCCCGAAGTGGAATTCTCGGGTGCCAAG 166996 0.4772440581691565 No Hit
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 156698 0.44781425559289134 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 137473 0.3928727179614389 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 137417 0.3927126801925254 RNA PCR Primer, Index 1 (100% over 26bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 130618 0.3732823803560497 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 125251 0.35794447489607545 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 121190 0.3463388788325473 RNA PCR Primer, Index 1 (100% over 27bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 120649 0.3447927996721512 RNA PCR Primer, Index 1 (100% over 33bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 118282 0.33802834611825533 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 111538 0.3187552262333911 RNA PCR Primer, Index 1 (100% over 28bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTT 111190 0.317760705812286 RNA PCR Primer, Index 1 (97% over 35bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 100920 0.28841092212047753 RNA PCR Primer, Index 1 (100% over 25bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 100527 0.2872877999207813 RNA PCR Primer, Index 1 (100% over 32bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 93736 0.2678803626227218 RNA PCR Primer, Index 1 (100% over 29bp)
GGCGGGGGTCGTCCCTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 93358 0.26680010768255596 RNA PCR Primer, Index 3 (100% over 34bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 87474 0.24998471067743414 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 85126 0.2432745556522768 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 84334 0.2410111643490721 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 83140 0.2375989304904529 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 80522 0.23011716479374847 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 79137 0.22615908783044225 RNA PCR Primer, Index 1 (100% over 25bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 76939 0.21987760540058882 RNA PCR Primer, Index 1 (100% over 24bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 76520 0.2186801799510399 RNA PCR Primer, Index 1 (100% over 32bp)
ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 76365 0.21823721826922582 RNA PCR Primer, Index 1 (100% over 30bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 72519 0.2072460529256333 RNA PCR Primer, Index 1 (100% over 27bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTA 71183 0.2034280090101264 RNA PCR Primer, Index 3 (100% over 36bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 67976 0.19426298892252858 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 67767 0.1936657051064051 RNA PCR Primer, Index 1 (100% over 30bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 65599 0.18746995719561244 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 63479 0.18141138451531702 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 63431 0.1812742092848198 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 59270 0.16938283149108904 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 57669 0.1648074659905452 RNA PCR Primer, Index 1 (100% over 25bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 53779 0.15369055668566353 RNA PCR Primer, Index 3 (100% over 34bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 49266 0.14079322720161958 RNA PCR Primer, Index 1 (100% over 26bp)
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 48682 0.1391242618972363 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGATGAAGCACTGTAGCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 48620 0.1389470772245107 RNA PCR Primer, Index 1 (100% over 29bp)
AATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCC 46896 0.13402020019581765 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 46860 0.1339173187729447 RNA PCR Primer, Index 1 (100% over 29bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 46305 0.1323312301703202 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 45758 0.1307680041061119 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 45527 0.13010784830934385 No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 44981 0.1285474800624376 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 44945 0.12844459863956464 RNA PCR Primer, Index 1 (100% over 28bp)
ACTAGACCTAGCCCAAAGATATGGAATTCTCGGGTGCCAAGGAACTCCA 44102 0.12603545865395663 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 43726 0.12496091934839479 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 42054 0.12018264881940709 RNA PCR Primer, Index 1 (100% over 31bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 40774 0.11652464267281364 RNA PCR Primer, Index 1 (100% over 26bp)
TAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCAGT 40406 0.11547296590566802 RNA PCR Primer, Index 1 (100% over 30bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 40071 0.11451559710948928 RNA PCR Primer, Index 1 (100% over 26bp)
ATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCA 39129 0.11182353321098064 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 39037 0.11156061401919423 RNA PCR Primer, Index 1 (100% over 26bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 38597 0.11030317440630276 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 37779 0.10796547985324537 RNA PCR Primer, Index 1 (100% over 25bp)
TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 37480 0.10711099247993955 RNA PCR Primer, Index 1 (100% over 31bp)
GAATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTC 36564 0.1044932318312836 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 35448 0.10130390772222243 No Hit
AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC 35009 0.10004932592663296 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 35407030 28.40243 332.09366 28
AATTC 35743950 28.37432 329.23724 26
ATTCT 35383220 27.593674 323.30447 27
TGCCA 36981460 26.083197 290.94913 36
TCTCG 35219355 24.403238 286.70288 29
GAACT 34989730 23.99184 282.39886 43
GCCAA 33186245 23.825697 296.00192 37
AACTC 28615110 23.783888 342.09882 44
CCAAG 33064075 23.737988 296.0644 38
GAATT 36010575 23.582426 272.15277 25
CTCGG 35201365 21.06811 247.43028 30
ACTCC 24563490 21.000582 351.70883 45
GTGCC 34059375 20.384626 247.10075 35
GGAAT 35689815 20.188442 234.96127 24
TGGAA 35361550 20.002754 234.83553 23
CAAGG 32674180 19.352085 244.24031 39
GGAAC 31639060 18.73901 244.00638 42
AAGGA 32475905 18.69952 237.50699 40
AGGAA 32024680 18.439707 237.55835 41
CGGGT 34998300 17.280193 203.9481 32
TCGGG 34983180 17.27273 204.06348 31
GGTGC 34721330 17.14344 204.03113 34
GGGTG 34959745 14.239851 168.33226 33
CTCCA 15469205 13.225411 96.57775 45
CCAGT 14002000 9.875676 101.813965 7
TCCAG 13725550 9.680695 70.79096 45
TTGGA 14947900 8.30669 147.356 22
CAGTC 9785760 6.9019423 48.97657 44
AGTCA 8826710 6.052319 47.632973 45
GTCAC 6806470 4.800635 45.598328 44
TGTTG 8623900 4.708047 115.53362 17
TCACT 5703900 4.6574545 52.789333 45
GTTGA 7948280 4.416934 109.98495 18
TCAGA 6423475 4.404464 159.90906 8
CTGGA 7523670 4.3776608 38.006485 23
ATGGA 7612355 4.306035 60.572002 22
GACTG 7331075 4.265599 124.70142 11
CACTT 5197115 4.243645 38.427876 45
TGATG 7485330 4.1596684 118.51043 14
TTATC 5049860 3.9381433 166.03241 5
TATCA 4958380 3.936069 169.02353 6
ACTGA 5563290 3.8146503 146.18079 12
CTTAT 4813400 3.7537396 165.50256 4
ATCAG 5456815 3.7416418 146.41963 7
CTGAT 5497325 3.703085 143.7498 13
CAGAC 5077215 3.6451304 153.22307 9
AGACT 5236630 3.5906649 146.52826 10
AGCTT 5301635 3.571265 142.47565 2
CTTGG 6211895 3.5507956 31.275986 23
GTGGA 7339880 3.523196 25.791239 20
TAGCT 5085965 3.4259863 142.24251 1
GCTTA 4832810 3.2554567 142.91759 3
ATGTT 4955640 3.188214 136.9091 16
GATGT 5208720 2.894535 118.49062 15
AGAAC 4085840 2.8517737 100.58412 15
AACTG 4013770 2.7521715 97.32128 17
CTGCC 3655025 2.6516786 104.36116 4
CTGTT 4002275 2.6485517 96.7979 19
AAGAA 3872665 2.627785 98.01022 14
ACTGT 3865745 2.6040268 95.08802 18
AAGCT 3688890 2.5294068 98.25747 1
ACTTA 3143085 2.4950488 27.02478 45
GTTGG 5166445 2.4362898 70.16949 21
CAGTT 3570460 2.4051182 97.17378 8
AGCTG 4123245 2.3991172 83.154976 2
TTGAA 3634195 2.379944 94.7575 11
ACTTG 3487190 2.3490262 28.771557 22
AGTTG 4207470 2.3381307 80.148094 9
TTGAC 3441915 2.3185284 77.81959 19
GCCAG 3689210 2.2475545 88.14395 6
TGACT 3206475 2.1599321 66.90531 20
TTTGG 3820450 2.0856988 37.315975 21
TGAAG 3651430 2.0654826 81.78874 12
GCTGC 3368630 2.016134 85.87595 3
GAAGA 3499055 2.0147445 83.09193 13
ACTGG 3392275 1.973801 34.200977 22
GATGG 3630020 1.7424362 42.879776 21
CTTAG 2417085 1.6281866 16.388262 45
GTAGT 2823140 1.5688456 45.443577 5
GCTTG 2714770 1.5517958 24.75413 20
AGTAG 2614075 1.4786881 46.083885 7
CGTGG 2952845 1.4579488 15.14727 19
GACTT 2086135 1.4052534 28.105444 21
GTTTG 2568675 1.402317 33.5523 20
TAGGC 2409835 1.4021666 20.501245 17
CCTGG 2334225 1.39704 6.445735 14
TTGAT 2140755 1.3772563 51.834637 19
TGTGG 2891965 1.3637356 10.721833 20
AGTGG 2807180 1.347467 24.862392 6
TAGTA 2018260 1.3217081 53.45688 6
TCACA 1561460 1.2978315 49.22012 2
CATGG 2201055 1.2806877 8.232927 23
GTAGA 2244015 1.2693585 30.825697 8
TAGTT 1958705 1.2601341 42.195404 18
GCACT 1732740 1.2221096 22.591795 5
AGGTA 2130645 1.2052292 47.793194 3
TTGTA 1860485 1.1969444 44.456673 13
CCGTG 1989335 1.1906223 17.411085 18
AATCC 1422825 1.1826028 28.823374 8
TGTAT 1749280 1.1254004 42.128086 14
TCCCG 1547735 1.122864 19.231316 12
CTGTG 1951685 1.1156071 10.446648 21
GGTAG 2302495 1.1052145 38.99023 4
TCTGA 1614095 1.0872799 7.242283 3
GATTG 1955535 1.0867093 30.48265 11
GTTCC 1567230 1.0859222 24.11337 15
GGCTT 1897170 1.0844457 24.662313 19
ATAGT 1645290 1.0774595 43.416866 17
AAGTA 1612090 1.0746287 28.573427 4
ACAGT 1559985 1.0696542 34.601715 4
AGTTT 1656735 1.0658615 31.470938 19
ATTGT 1654545 1.0644525 34.57177 12
TGAGG 2206080 1.0589346 37.83477 1
TTCAA 1331655 1.0570965 33.620796 1
AGATT 1612860 1.0562217 35.05952 10
GCTGT 1819940 1.0403001 10.199912 20
GCCTG 1736330 1.0391982 15.432859 17
GAGGT 2151300 1.0326397 40.122063 2
TATAG 1568760 1.0273417 41.868465 16
GTATA 1557305 1.0198401 42.01547 15
TGGCT 1765050 1.0089242 29.454277 8
CCTGT 1455220 1.0083115 17.254137 18
TTAGG 1804475 1.0027637 10.286554 45
GCTAA 1455915 0.99829525 37.635418 10
CACAG 1387350 0.9960326 37.3149 3
CAGGA 1673955 0.9914408 25.789196 12
CAGTG 1699865 0.98906934 29.669502 5
ATTGC 1462500 0.9851631 22.304014 2
GGCTA 1679015 0.9769378 29.429615 9
AGGCT 1655910 0.9634942 20.684864 18
GACCT 1364655 0.96249753 15.355053 4
TTCAC 1173880 0.95851827 40.810272 1
TAGAT 1458065 0.95485044 34.98889 9
CTAAG 1338585 0.9178441 34.751858 11
AAGTT 1354215 0.8868416 32.28327 13
TAAGT 1353860 0.8866092 33.157635 12
CCAGG 1453385 0.8854367 21.60241 11
AGTTC 1301785 0.87690294 32.453056 14
TCTGG 1530755 0.8749984 5.204091 8
CAAGT 1241640 0.85137063 29.324793 3
AAGCA 1210115 0.844618 12.085448 15
TTGCA 1246125 0.8394095 22.27015 3
GTAAT 1258055 0.8238689 28.15069 6
AGGAT 1444255 0.816963 24.283794 13
AAAGC 1162705 0.8115275 12.035992 14
ATAGG 1418390 0.80233216 25.54085 16
TTCCC 933895 0.7843837 5.37207 6
GTCTG 1364015 0.7796877 6.0869713 2
CCCGG 1240835 0.77757925 16.132418 13
CAGAT 1128025 0.77346694 14.058483 9
AGTAA 1098965 0.7325766 28.466036 5
TCAAG 1062805 0.72874665 29.115788 2
CCCAA 836060 0.72759455 16.154469 10
ATCCA 873620 0.7261227 28.620161 9
GGCCT 1199175 0.7177095 15.578164 16
GTGGC 1452970 0.7173948 26.18001 7
CTGAG 1228670 0.7149038 6.374427 4
CCCTG 984345 0.71413106 5.367288 13
TGCAC 1008255 0.7111269 23.046654 4
TAATC 886605 0.70380616 27.502106 7
ACATG 1025120 0.70290667 9.133278 22
TCCGT 1013020 0.7019142 20.215126 17
CGACC 948950 0.70078474 15.275137 3
TTCTG 1056625 0.69923383 9.3290415 16
GTCCC 948835 0.6883689 22.183552 11
ATCCC 801705 0.68541855 21.574562 8
TTCCG 988120 0.6846612 21.79592 16
CCGGC 1089470 0.6827252 16.17005 14
TTTTG 1075835 0.67995894 9.271397 14
TGAAT 1034465 0.67744535 9.362777 9
TATGG 1211700 0.67335314 8.098747 22
GGATA 1186820 0.67134136 24.148678 14
AACAT 829465 0.67024213 14.389208 5
TCCTT 833290 0.66843957 11.393386 11
TTGTC 1008360 0.66729397 20.673637 9
AGGCA 1123215 0.6652516 6.6322074 45
CTCAG 942740 0.6649189 14.503469 7
ACCAC 763920 0.6648135 6.4578443 2
ATCTG 979665 0.65991783 6.4466147 18
AGCAC 919075 0.65983975 10.950681 15
GATAG 1161485 0.65701026 24.671354 15
TGTCT 976650 0.6463094 6.5447197 1
CGGCC 1027350 0.64379716 16.175837 15
CTTGT 962775 0.6371275 20.654287 8
CTGTA 944570 0.63627726 8.337363 19
ACCTC 742295 0.6346259 18.398304 5
TCGCT 913725 0.6331135 9.291011 11
GGACT 1086440 0.632147 13.012428 4
TGCTG 1101755 0.62977666 6.1754193 16
CCAAA 744110 0.6295574 14.477427 11
CTACT 766715 0.62605244 6.6269455 13
CCATA 744560 0.6188525 13.130888 2
CATTG 917765 0.618221 8.981036 5
TATTG 956495 0.6153617 17.135265 1
CTGTC 885505 0.61356 10.429479 12
AGCAG 1026025 0.6076885 10.256587 16
AAAGT 904385 0.60286844 10.659245 6
CACCA 690265 0.6007141 5.495991 1
GGGCT 1189430 0.58727366 6.8327193 18
ACATT 737370 0.5853402 10.96682 2
CAGAA 838590 0.5853065 14.929924 15
GTCGC 965285 0.57772565 8.206392 10
CGCTT 826710 0.57282144 7.13034 12
CGTCG 951695 0.569592 6.850273 9
TAGAA 852425 0.5682316 11.570492 10
TCGGT 993875 0.5681112 8.000841 15
AAAGA 835640 0.567021 9.687819 2
CATCT 688755 0.56239504 6.613118 6
CACTA 673840 0.5600725 6.4048514 15
CCTCA 654415 0.5594928 17.438717 6
CAACG 774130 0.555778 12.385289 1
CTGAA 809685 0.55518675 7.479813 8
CAAAG 790300 0.5516018 11.963965 1
TCCCA 640115 0.54726696 14.689116 9
AGAAA 805525 0.5465865 10.705746 11
TGTCC 786680 0.54508483 17.308434 10
GATCA 792135 0.543153 14.119065 11
GTGGT 1150550 0.54255354 5.0655494 15
ACATC 650785 0.54090995 14.100664 6
GCAGC 880235 0.53626007 10.376221 17
CCCAT 626470 0.5356012 13.178128 1
CTCCT 629965 0.52911115 11.918408 10
AGGTT 951765 0.52890486 7.9073634 10
ATTCC 647395 0.528623 8.330194 12
TTGTG 967615 0.5282502 7.38128 19
ATACC 632605 0.52579933 6.334277 19
CGGTG 1053285 0.5200529 7.34514 16
AATTG 789395 0.5169551 5.383247 11
CTTTT 673090 0.5156733 10.960926 13
GAATC 750100 0.51433027 12.065475 6
TGAGC 883890 0.5142929 6.0355377 5
TGAGA 907335 0.5132468 6.218294 2
GCCCA 694715 0.51303613 7.591535 11
ATAAA 649940 0.5105674 12.14482 4
GACAT 739520 0.50707585 8.553043 21
TTTGT 794720 0.50228614 9.803212 12
CGGAA 847995 0.5022458 10.416476 4
TAGGT 898745 0.49944112 7.7177663 9
GAAAG 865280 0.49822542 9.149105 12
GTGCT 860260 0.4917352 6.075779 15
ACGGA 828000 0.49040326 10.884689 3
CATAA 606460 0.4900448 12.4326105 3
CGCTG 818050 0.48960513 7.896235 10
CCGGG 941800 0.48688328 7.5054607 2
AGATC 706420 0.48437968 13.925202 10
GTAAA 723980 0.4826094 11.003035 2
AGATG 841020 0.4757347 9.25427 15
ACTAC 572260 0.47564268 6.143684 16
ATCAC 567275 0.4714993 8.021126 1
AAACA 572150 0.47060257 13.852656 4
GCGTC 782970 0.4686096 6.2982073 8
CAGCT 661325 0.4664356 13.290834 18
TACTG 690485 0.4651216 5.482907 14
GCATC 653820 0.4611423 5.619738 45
TCTCC 547260 0.4596468 12.1234045 9
TAAAG 686040 0.45731837 10.315287 5
AAAAG 669055 0.45398524 11.835292 13
TGACA 659815 0.4524235 8.214813 20
TGGAC 776975 0.45208415 12.789786 3
ATTCA 565905 0.4492276 11.033196 4
ACCGG 733915 0.44711846 8.231776 1
CAAAA 539345 0.4436199 14.348082 12
TGTAA 674465 0.4416903 10.772377 1
TTCCA 540140 0.44104517 8.169309 13
AGCGT 756215 0.440005 6.035169 7
GTCAG 755550 0.43961805 12.538966 13
GTTGT 804735 0.43932903 7.055992 18
GAAGG 895130 0.43736568 9.952131 17
TCTGC 624180 0.43248984 6.3628864 19
AGAAT 648100 0.43202728 9.622326 4
CCTTT 538470 0.43194407 11.364338 12
AGACC 601085 0.43154228 7.937194 4
GCGAC 686080 0.4179762 12.110801 2
TAAAC 514840 0.41601208 13.607967 3
GCTAC 589655 0.4158864 7.6307187 2
GTCGG 839185 0.41434237 7.0218573 14
GAGCG 822555 0.41340655 5.166765 6
CTACA 496450 0.41263205 9.199656 3
AACGC 571540 0.41033083 9.561313 8
TGCCC 561060 0.4070426 6.614576 21
CACAT 487145 0.40489805 7.9130754 3
AGAAG 702985 0.40477648 12.237404 16
CCCGA 547615 0.40440512 6.68009 23
GGTGA 840590 0.40348935 6.0483794 17
GTGAT 725750 0.40330613 5.159667 15
CGACT 571785 0.4032826 7.6262674 13
GGATT 723915 0.40228644 5.741878 14
CCCCC 436330 0.40176734 5.617752 1
ACCCT 469905 0.40174574 5.1036797 21
CATCC 468840 0.40083525 14.261634 7
GAAAC 570525 0.39820653 6.7156663 7
GATTT 613880 0.39494008 8.743479 15
TGGGC 790435 0.39027232 7.2189713 17
CGCGA 639955 0.3898758 12.186039 1
CTGGC 650230 0.38916442 5.294232 9
CCGAA 538735 0.3867789 6.4522557 24
TGATC 571110 0.3847087 6.322133 16
GAGTC 658800 0.3833239 12.599954 11
GTTCT 576880 0.38175696 9.057547 15
GGTTG 809070 0.3815252 6.844148 11
TCCAT 466715 0.38109082 8.438185 14
GTAGG 784035 0.37634254 7.27943 8
TCAAC 448765 0.3729979 10.817601 6
TCTGT 560015 0.3705964 5.8706985 17
AACGG 625290 0.37034333 10.853328 2
CAGCA 513755 0.36884472 7.409948 4
ACTAG 532740 0.3652904 7.2667465 1
TCCCC 415345 0.36526158 7.203739 9
ATCCT 447190 0.36514792 7.330189 8
TGGAG 753450 0.3616615 10.528419 9
CCCCG 472825 0.35916626 6.332421 10
CATTC 437445 0.3571907 11.510219 3
AACCC 409635 0.3564914 8.096923 9
TTGAG 639225 0.3552234 5.724222 1
CGGGG 832560 0.35507265 6.408627 3
ACCCG 478125 0.35308784 6.9728045 10
GGAGT 732515 0.35161257 10.4986 10
AGCCC 471025 0.3478446 7.973238 10
CCGAC 469000 0.34634915 6.738933 12
GATCT 506940 0.3414828 6.414645 17
AAGGC 573640 0.33975235 8.352644 18
GAGAA 582565 0.33543903 6.1507382 3
GGAAA 576765 0.3320994 5.59546 6
CTAGA 484275 0.33205885 7.2801847 2
TACCC 387335 0.33115247 5.1957884 20
GAAGC 557335 0.33009532 6.2047725 19
TGAGT 591400 0.3286466 6.7161665 19
CCGGT 535680 0.32060593 5.6867647 12
TACAT 402360 0.31940204 8.5769005 4
TAATT 420235 0.31860355 6.498275 7
TGTTT 498735 0.315215 5.194103 19
GCCCG 500550 0.3136737 5.733434 22
AAACC 367605 0.31101373 7.86081 8
ACGCT 437700 0.30871186 9.022789 9
GAAGT 543020 0.30716684 5.0465016 26
CGAAG 515000 0.30502138 5.2635207 25
TAGAC 434875 0.29818615 7.32888 3
CATAG 432220 0.29636562 8.561849 16
TAAAT 373505 0.2882475 5.0067825 11
TTGGG 606670 0.28608143 6.9531856 16
AAATA 361980 0.28435734 5.380765 12
AAGAT 416760 0.2778147 6.8508363 16
CCCCA 307855 0.2755827 5.110473 3
TGTCG 481525 0.27524558 7.926266 13
GTGAG 559660 0.26864088 5.727719 18
AGCTA 384290 0.2635009 7.313601 1
GGAAG 530270 0.259093 5.705364 18
CTAGC 358950 0.25316912 7.2896504 8
TAGCC 358585 0.25291166 7.3686533 9
TTGCC 347635 0.24087378 6.6917973 7
ACCTA 286260 0.2379294 8.465372 6
TGTGC 404825 0.23140295 5.9266367 14
TTCAG 334870 0.22557372 5.944867 10
AGATA 326065 0.21735686 5.7180057 17
CCTAG 304730 0.21492751 7.251418 7
TAGCA 274255 0.18805182 6.0957017 1